BIOWIT: Wentworth Institute of Technology Bioinformatics:

Home of the Wentworth Minor in Bioinformatics

Featured Videos from Howard Hughes Medical Institute

How the Ear Hears. Nerve Mechanics. DNA Transcription. DNA/RNA Translation. DNA Replication. HIV Life Cycle.
http://www.hhmi.org/biointeractive/animations/index.html

Featured Article from Science

Science presents 11 papers describing an early hominid species, Ardipithecus ramidus, and its environment. These 4.4 million year old hominid fossils sit within a critical early part of human evolution, and cast new and sometimes surprising light on the evolution of human limbs and locomotion, the habitats occupied by early hominids, and the nature of our last common ancestor with chimps.
http://www.sciencemag.org/ardipithecus/

Sample Job Listing in Bioinformatics

  MS/BS in Computational Sciences or related discipline.
Bioinformatics: at least 2 years experience using common bioinformatics applications, e.g. sequence similarity, multiple sequence alignment.
Biological training a plus.
Software Development: Java, at least 2 years experience developing scientific applications.
Perl: at least 2 years experience in scientific application development. Experience with BioMart.
Python: at least 2 years experience of scientific software development.
System Administration: experience administering Linux workstations and clusters. Software    installation, account administration, hardware configuration. Red Hat and Platform LSF/Sun Grid Engine. Shell scripting.
Biology: knowledge of genes, proteins, antibodies, protein structure.
Experience in creating and managing relational data stores (Oracle).
Experience with Sharepoint.
Experience with creating and managing web service architecture.
Demonstrated excellent interpersonal and communication skills, both verbal and written.
Proven ability to operate in an independent manner.
Knowledge of pharmaceutical industry and computational sciences.
 Bioinformatics Developer

2010 Bioinfoirnatics Presentation (Professor Rilett): Technology in Century 21

Presentation: Bioinformatics in the computer science curriculum, ccscne 2011

Presentation: Bioinformatics Minor Presentation at Polytech Summit, Wentworth June 5, 2013

Bioinformatics Courses at WIT and Requirements:

 

Bioinformatics Minor Declaration Form

Course Descriptions and Requirements


Bioinformatics Resources:

R-Studio Portal
Links: R-Studio on crowbar.cs.wit.edu ( need account) BIOMART CENTRAL
Links: BIOMART -- the central portal to most databases in the world Basics
Links: HHMI's BioInteractive - Animations |Dolan Learning Center, Cold Harbor Springs Lab |Return to the RNAi World: Rethinking Gene Expression and Evolution (Craig Mello) |A DNA Driven World: Dr J Craig Venter | Google Features | Bioinformatics.ORG Jobs |
Yale Into to Bioinformatics (What is it?)
| CMBI Intro to Bioinformatics (What is it?)| Bioinformatics WIKI
HTML and UNIX
Links: HTML Tutorial | Putty, Winsshd | Winscp
UNIX Scripting Perl and Other Programming Languages
Perl for Exploring DNA [ Book and Exercises] Relational Databases NCBI Entrez | Pubmed Tutorial BLAST
Links: BLAST Tutorial
ORF Finder, GENSCAN and PSI-BLAST
Links: ORF Finder | GENSCAN
Multiple Sequence Alignments (ClustalW) and Protein Analysis
Links: ClustalW | Prosite | Pfam | PRINTS | Blocks | Uniprot
Protein Data Bank and Rasmol
Links: PDB | Rasmol
Secondary Structure Calculation and Classification
Links:  SCOP | CATH | Chime
Bioinformatics Applications
Links: DNASYS Smartnote| DNASYS Smartnote Blog | Benjamin Franklin Awards at Bioinformatics.org

Refer all questions to Professor Rilett: biowit.cs.wit. edu_clickme

UNIX, Oracle and Bioinformatics Servers: